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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917561.1_cds_XP_016467135.1_59912
CDS Infomation

[gene=LOC107789780] [db_xref=GeneID:107789780] [protein=WAT1-related protein At3g02690, chloroplastic-like isoform X2] [protein_id=XP_016467135.1] [location=join(5782..6456,7096..7143,7952..8074,9181..9282,10826..10997,11089..11149,11365..11467)] [gbkey=CDS]
Sequence

ATGGCATGGTCTCCATTTTCTTCCTCTTCTTCTTTTTCCAGTCCTCGCTGCTATTCACCC
ACTACTACTCTTCACCTTAATCCAACAAATTCCCTTTTCAAAACCTCCTCTTTACCTCAT
ACTTTGTTCCATCACCACTCAATTATTCACAAACAAAATGGGTCTCAACAATCACTGCAC
CCACGTAGAATTTCTTCCAAGAATCATCATCTCCACCTCAACTCCCGCAGCAAAAAGTTC
ATTTCTTTTTCAAAAACCAAGGCCACTGAATCCAGTGTTGAAGAGAAACCATCATCATCA
GAACAACTAGACTGTGTGGGAACTGGGCTTGACGTGGAGTGTGTAGTGAACCCATCTGAG
CAATTGTCCAAAGACTCAAACTACAATTTTCAAAATGTTAAAAAAGATGAAGGGGTGTCG
TCTTTGGAGTTACTTGGGACAATATGGGAATGGGGTTTGCTAATTTCGCCTTTCTTCTTT
TGGGGTACAGCTATGGTAGCAATGAAGGAGGTTTTACCAAAGACTGGCCCTTTTTTCGTT
TCAGCATTTAGGTTGATTCCAGCTGGTTTAATGTTGGTTGGTTTTGCTAGTTTAAGGGGT
AGGAAGTTCCCCTCTGGATTCAATGCTTGGCTTTCTATTACACTCTTTGCTCTTGTTGAT
GCTGCTTGTTTTCAGGGATTTCTTGCAGAAGGACTTCAGAGGACATCTGCTGGCTTAGGC
AGTGTGATAATAGATTCACAGCCTCTGACAGTGGCTGTGCTTGCAGCTTTGTTATTTGGT
GAGTCCATAGGTTTTGTTGGAGCTGCTGGTCTAGTGCTCGGGGTGGTAGGCCTTTTGCTT
CTTGAGGTACCTGCTCTTTCAGTTGATAATAGCAACTTTTCCCTATGGGGAAGTGGAGAG
TGGTGGATGCTTCTTGCAGCACAAAGCATGGCTGTTGGCACAGTAATGCACATGGTTATT
GGTGGACTCCCTCTGGTGGCTATCTCCATTCTCAATCATGACCCTGTCCTTAGTGGGAAT
TATATGGAGCTAACAGCGACTGACTTGTTGGCTTTGCTCTATACCTCAATCTTTGGAAGT
GCCATAAGCTATGGTGTCTACTTCTACAACGCAACAAGAGGTAGCCTGACAAAGCTCAGT
TCCCTTACCTTTTTAACTCCAATGTTCGCTTCGATTTTTGGGTTCCTATATCTGGATGAG
ACATTCACACCCGTGCAACTAGGTGGAGCATTTGTCACAGTAGCTGCAATTTACTTGGTT
AACTACAAAAGTGATGCCAAATGA

Peptide Sequence

PEP ID

XP_016467135.1
PEP Infomation

PREDICTED: WAT1-related protein At3g02690, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MAWSPFSSSSSFSSPRCYSPTTTLHLNPTNSLFKTSSLPHTLFHHHSIIHKQNGSQQSLH
PRRISSKNHHLHLNSRSKKFISFSKTKATESSVEEKPSSSEQLDCVGTGLDVECVVNPSE
QLSKDSNYNFQNVKKDEGVSSLELLGTIWEWGLLISPFFFWGTAMVAMKEVLPKTGPFFV
SAFRLIPAGLMLVGFASLRGRKFPSGFNAWLSITLFALVDAACFQGFLAEGLQRTSAGLG
SVIIDSQPLTVAVLAALLFGESIGFVGAAGLVLGVVGLLLLEVPALSVDNSNFSLWGSGE
WWMLLAAQSMAVGTVMHMVIGGLPLVAISILNHDPVLSGNYMELTATDLLALLYTSIFGS
AISYGVYFYNATRGSLTKLSSLTFLTPMFASIFGFLYLDETFTPVQLGGAFVTVAAIYLV
NYKSDAK

Transcript Sequence

Gene sequence data has not been registered.